ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6hkqA1 - ECOD Domain | ECOD

ECOD/Domains/e6hkqA1

e6hkqA1

UID: 002607730

PDB

Range: A:6-171
PDB: 6HKQ chain A(all domains)
UniProt: P36969 (all domains)
Gene: GPX4

Molecule: Phospholipid hydroperoxide glutathione peroxidase

3D Structure

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Related Domains

Browse other domains in GSHPx →

Classification

AArchitecturea+b three layers(a.12)

XX-groupThioredoxin-like(2485)

HH-groupThioredoxin-like(2485.1)

TT-groupThioredoxin-like(2485.1.1)

FFamilyGSHPx(2485.1.1.2)

Ligands

in contact, ≤ 4 Å

(2~{S})-2-[2-chloranylethanoyl-(3-chloranyl-4-methoxy-phenyl)amino]-~{N}-(2-phenylethyl)-2-thiophen-2-yl-ethanamideG9N

+ 3 additives (Dimethyl sulfoxide, Sulfate ion, 1,2-ETHANEDIOL)

Dimethyl sulfoxideDMS
DrugBank DB01093
Sulfate ion

Pfam Families

Glutathione peroxidase

ClanCL0172Thioredoxin

External Links

ECOD PDB View: 6HKQ RCSB PDB: 6HKQ PDBe: 6HKQ UniProt: P36969

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.