ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ocdA1 - ECOD Domain | ECOD

ECOD/Domains/e6ocdA1

e6ocdA1

UID: 002607888

PDB

Range: A:5-261
PDB: 6OCD chain A(all domains)
UniProt: P02879 (all domains)

Molecule: Ricin A chain

3D Structure

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Related Domains

Browse other domains in RIP →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRIP/Polo-box domain(292)

HH-groupRibosome inactivating proteins (RIP)(292.1)

TT-groupRibosome inactivating proteins (RIP)(292.1.1)

FFamilyRIP(292.1.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Zinc ionZN
metal

+ 2 additives (Imidazole, 1,2-ETHANEDIOL)

ImidazoleIMD

Pfam Families

Ribosome inactivating protein

External Links

ECOD PDB View: 6OCD RCSB PDB: 6OCD PDBe: 6OCD UniProt: P02879

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03366

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.