ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6w9cB2 - ECOD Domain | ECOD

ECOD/Domains/e6w9cB2

e6w9cB2

UID: 002608509

PDB

Range: B:61-314
PDB: 6W9C chain B(all domains)
UniProt: P0DTD1 (all domains)
Gene: rep

Molecule: Non-structural protein 3

3D Structure

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Related Domains

Browse other domains in CoV_peptidase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCysteine proteinases-like(219)

HH-groupCysteine proteinases(219.1)

TT-groupCysteine proteinases(219.1.1)

FFamilyCoV_peptidase(219.1.1.43)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08715CoV_peptidase

Coronavirus papain-like peptidase

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 6W9C RCSB PDB: 6W9C PDBe: 6W9C UniProt: P0DTD1

Downloads

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