ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6khjA1 - ECOD Domain | ECOD

ECOD/Domains/e6khjA1

e6khjA1

UID: 002611103

PDB

Range: A:28-372
PDB: 6KHJ chain A(all domains)
UniProt: Q8DL32 (all domains)
Gene: ndhA

Molecule: NAD(P)H-quinone oxidoreductase subunit 1

3D Structure

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Related Domains

Browse other domains in NADHdh →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupSodium/proton antiporter subunits-like(3281)

HH-groupSodium/proton antiporter subunits-like(3281.1)

TT-groupNADH-quinone oxidoreductase subunit 8 (Nqo8)-related(3281.1.2)

FFamilyNADHdh(3281.1.2.1)

Ligands

in contact, ≤ 4 Å

Digalactosyl Diacyl Glycerol (Dgdg)DGD
drugDrugBank DB03426
1,2-Dipalmitoyl-Phosphatidyl-GlyceroleLHG
drugDrugBank DB02043

Pfam Families

NADH dehydrogenase

ClanCL0425ComplexI-N

External Links

ECOD PDB View: 6KHJ RCSB PDB: 6KHJ PDBe: 6KHJ UniProt: Q8DL32

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONEPL9

1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROLSQD

Shown in the structure viewer. Drug annotations from DrugDomain.