ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6m7eA1 - ECOD Domain | ECOD

ECOD/Domains/e6m7eA1

e6m7eA1

UID: 002617317

PDB

Range: A:1-595
PDB: 6M7E chain A(all domains)
UniProt: P80025 (all domains)
Gene: LPO

Molecule: Lactoperoxidase

3D Structure

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Related Domains

Browse other domains in An_peroxidase →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupHeme-dependent peroxidases(136)

HH-groupHeme-dependent peroxidases(136.1)

TT-groupHeme-dependent peroxidases(136.1.1)

FFamilyAn_peroxidase(136.1.1.3)

Ligands

in contact, ≤ 4 Å

FerrohemeHEM
drugDrugBank DB18267
N-AcetylglucosamineNAG
drugDrugBank DB00141

Pfam Families

PF03098An_peroxidase

Animal haem peroxidase

ClanCL0617Peroxidase

External Links

ECOD PDB View: 6M7E RCSB PDB: 6M7E PDBe: 6M7E UniProt: P80025

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Calcium ion

metal

Chloride ionCL

Iodide ionIOD

1-(OXIDOSULFANYL)METHANAMINEOSM

Thiocyanate ionSCN

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.