ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6vt1B2 - ECOD Domain | ECOD

ECOD/Domains/e6vt1B2

e6vt1B2

UID: 002618913

PDB

Range: B:136-339
PDB: 6VT1 chain B(all domains)
UniProt: D2W2Z5 (all domains)
Gene: NAEGRDRAFT_82186

Molecule: Predicted protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in RNA_ligase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupATP-grasp(206.1.3)

FFamilyRNA_ligase(206.1.3.23)

Pfam Families

PF09414RNA_ligase

RNA ligase

ClanCL0179ATP-grasp

External Links

ECOD PDB View: 6VT1 RCSB PDB: 6VT1 PDBe: 6VT1 UniProt: D2W2Z5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure