ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6kc6E1 - ECOD Domain | ECOD

ECOD/Domains/e6kc6E1

e6kc6E1

UID: 002619157

PDB

Range: E:867-935
PDB: 6KC6 chain E(all domains)
UniProt: Q96EP0 (all domains)
Gene: RNF31

Molecule: E3 ubiquitin-protein ligase RNF31

3D Structure

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Related Domains

Browse other domains in IBR_1 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupIBR domain(376.1.6)

FFamilyIBR_1(376.1.6.2)

Ligands

in contact, ≤ 4 Å

2-[3-[2,6-bis(fluoranyl)-4-(1~{H}-pyrazol-4-yl)phenyl]-3-oxidanylidene-propyl]-4-(1-methylpyrazol-4-yl)benzoic acidD60
Zinc ionZN
metal
Chloride ionCL

Pfam Families

IBR domain

ClanCL0229RING

External Links

ECOD PDB View: 6KC6 RCSB PDB: 6KC6 PDBe: 6KC6 UniProt: Q96EP0

Downloads

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within 5 Å only

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.