ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6vbmA1 - ECOD Domain | ECOD

ECOD/Domains/e6vbmA1

e6vbmA1

UID: 002620573

PDB

Range: A:236-299,A:406-573
PDB: 6VBM chain A(all domains)
UniProt: P08149 (all domains)
Gene: penA

Molecule: Probable peptidoglycan D,D-transpeptidase PenA (EC 3.4.16.4) (Penicillin-binding protein 2) (PBP-2)

3D Structure

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Related Domains

Browse other domains in Transpeptidase →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3)

TT-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3.1)

FFamilyTranspeptidase(223.3.1.3)

Pfam Families

PF00905Transpeptidase

Penicillin binding protein transpeptidase domain

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 6VBM RCSB PDB: 6VBM PDBe: 6VBM UniProt: P08149

Downloads

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