ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6xxiA1 - ECOD Domain | ECOD

ECOD/Domains/e6xxiA1

e6xxiA1

UID: 002620805

PDB

Range: A:28-363
PDB: 6XXI chain A(all domains)
UniProt: P49366 (all domains)
Gene: DHPS

Molecule: Deoxyhypusine synthase

3D Structure

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Related Domains

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Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupDHS-like NAD/FAD-binding domain(2003.1.4)

FFamilyDS(2003.1.4.3)

Ligands

in contact, ≤ 4 Å

MercaptoethanolBME
drugDrugBank DB03345
NadideNAD
drugDrugBank DB14128

+ 3 additives (Acetate, Formic acid, 1,2-ETHANEDIOL)

Pfam Families

Deoxyhypusine synthase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6XXI RCSB PDB: 6XXI PDBe: 6XXI UniProt: P49366

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

AcetateACT
DrugBank DB14511
Formic acidFMT
DrugBank DB01942
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.