ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6xxlB1 - ECOD Domain | ECOD

ECOD/Domains/e6xxlB1

e6xxlB1

UID: 002620811

PDB

Range: B:28-364
PDB: 6XXL chain B(all domains)
UniProt: P49366 (all domains)
Gene: DHPS

Molecule: Deoxyhypusine synthase

3D Structure

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Related Domains

Browse other domains in DS →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupDHS-like NAD/FAD-binding domain(2003.1.4)

FFamilyDS(2003.1.4.3)

Ligands

in contact, ≤ 4 Å

MercaptoethanolBME
drugDrugBank DB03345
SpermineSPM
drugDrugBank DB00127

+ 4 additives (Acetate, Formic acid, (4r)-2-Methylpentane-2,4-Diol, …)

Pfam Families

Deoxyhypusine synthase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6XXL RCSB PDB: 6XXL PDBe: 6XXL UniProt: P49366

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

AcetateACT
DrugBank DB14511
Formic acidFMT
DrugBank DB01942
(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.