ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6wrhA2 - ECOD Domain | ECOD

ECOD/Domains/e6wrhA2

e6wrhA2

UID: 002626053

PDB

Range: A:0-60
PDB: 6WRH chain A(all domains)
UniProt: P0DTD1 (all domains)
Gene: rep

Molecule: Non-structural protein 3

3D Structure

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Related Domains

Browse other domains in CoV_peptidase →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyCoV_peptidase(221.1.1.32)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 1 additive (Phosphate ion)

Phosphate ionPO4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08715CoV_peptidase

Coronavirus papain-like peptidase

ClanCL0125Peptidase_CA

External Links

ECOD PDB View: 6WRH RCSB PDB: 6WRH PDBe: 6WRH UniProt: P0DTD1

Downloads

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