ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ru8A1 - ECOD Domain | ECOD

ECOD/Domains/e6ru8A1

e6ru8A1

UID: 002628582

PDB

Range: A:2-294
PDB: 6RU8 chain A(all domains)
UniProt: P48730 (all domains)
Gene: CSNK1D

Molecule: Casein kinase I isoform delta

3D Structure

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Related Domains

Browse other domains in Pkinase, Pkinase_fungal →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyPkinase, Pkinase_fungal(206.1.1.72)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Sodium ionNA
metal

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Sulfate ionSO4

Pfam Families

PF00069Pkinase

Protein kinase domain

ClanCL0016PKinase

PF17667Pkinase_fungal

Fungal protein kinase

ClanCL0016PKinase

External Links

ECOD PDB View: 6RU8 RCSB PDB: 6RU8 PDBe: 6RU8 UniProt: P48730

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.