ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6v64B1 - ECOD Domain | ECOD

ECOD/Domains/e6v64B1

e6v64B1

UID: 002628684

PDB

Range: B:16-245
PDB: 6V64 chain B(all domains)
UniProt: P00734 (all domains)
Gene: F2

Molecule: Prothrombin (EC 3.4.21.5) (Coagulation factor II) [Cleaved into: Activation peptide fragment 1; Activation peptide fragment 2; Thrombin light chain; Thrombin heavy chain]

3D Structure

Loading viewer...

Related Domains

Browse other domains in Trypsin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel 2(1.1.17)

FFamilyTrypsin(1.1.17.1)

Pfam Families

PF00089Trypsin

Trypsin

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 6V64 RCSB PDB: 6V64 PDBe: 6V64 UniProt: P00734

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure