ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6iy8D1 - ECOD Domain | ECOD

ECOD/Domains/e6iy8D1

e6iy8D1

UID: 002629375

PDB

Range: D:13-223
PDB: 6IY8 chain D(all domains)
UniProt: Q7WSM9 (all domains)

Molecule: Positive regulator CapR

3D Structure

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Related Domains

Browse other domains in V4R,XylR_N →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupH-NOX domain(873)

HH-groupH-NOX domain(873.1)

TT-groupH-NOX domain(873.1.1)

FFamilyV4R,XylR_N(873.1.1.2)

Ligands

in contact, ≤ 4 Å

PhenolIPH
drugDrugBank DB03255
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

V4R domain

ClanCL0210HNOX-like

Activator of aromatic catabolism

ClanCL0210HNOX-like

External Links

ECOD PDB View: 6IY8 RCSB PDB: 6IY8 PDBe: 6IY8 UniProt: Q7WSM9

Downloads

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