ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6jkeB1 - ECOD Domain | ECOD

ECOD/Domains/e6jkeB1

e6jkeB1

UID: 002629403

PDB

Range: B:76-182
PDB: 6JKE chain B(all domains)
UniProt: P25440 (all domains)
Gene: BRD2

Molecule: Bromodomain-containing protein 2

3D Structure

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Related Domains

Browse other domains in Bromodomain →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBromodomain-like(633)

HH-groupBromodomain(633.1)

TT-groupBromodomain(633.1.1)

FFamilyBromodomain(633.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Dimethyl sulfoxide, Glycerin, Triethylene glycol)

Dimethyl sulfoxideDMS
DrugBank DB01093
GlycerinGOL
DrugBank DB09462
Triethylene glycol

Pfam Families

PF00439Bromodomain

Bromodomain

External Links

ECOD PDB View: 6JKE RCSB PDB: 6JKE PDBe: 6JKE UniProt: P25440

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB02327

Shown in the structure viewer. Drug annotations from DrugDomain.