ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ka0C1 - ECOD Domain | ECOD

ECOD/Domains/e6ka0C1

e6ka0C1

UID: 002629681

PDB

Range: C:1-145
PDB: 6KA0 chain C(all domains)
UniProt: P61889 (all domains)
Gene: mdh

Molecule: Malate dehydrogenase

3D Structure

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Related Domains

Browse other domains in Ldh_1_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyLdh_1_N(2003.1.1.2)

Ligands

in contact, ≤ 4 Å

Silver ionAG
metal

+ 1 additive (Tromethamine)

TromethamineTRS
DrugBank DB03754

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00056Ldh_1_N

lactate/malate dehydrogenase, NAD binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6KA0 RCSB PDB: 6KA0 PDBe: 6KA0 UniProt: P61889

Downloads

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