ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6kk6B1 - ECOD Domain | ECOD

ECOD/Domains/e6kk6B1

e6kk6B1

UID: 002629990

PDB

Range: B:18-169
PDB: 6KK6 chain B(all domains)
UniProt: Q32ZE1 (all domains)

Molecule: NS3 protease

3D Structure

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Related Domains

Browse other domains in Peptidase_S7 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel(1.1.5)

FFamilyPeptidase_S7(1.1.5.6)

Ligands

in contact, ≤ 4 Å

1-[(5~{R},8~{R},15~{S},18~{S})-15,18-bis(4-azanylbutyl)-5-methyl-4,7,14,17,20-pentakis(oxidanylidene)-3,6,13,16,19-pentazabicyclo[20.3.1]hexacosa-1(25),22(26),23-trien-8-yl]guanidineDV0

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462

Pfam Families

PF00949Peptidase_S7

Peptidase S7, Flavivirus NS3 serine protease

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 6KK6 RCSB PDB: 6KK6 PDBe: 6KK6 UniProt: Q32ZE1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.