ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6s8eH1 - ECOD Domain | ECOD

ECOD/Domains/e6s8eH1

e6s8eH1

UID: 002634296

PDB

Range: H:2-138,H:158-206
PDB: 6S8E chain H(all domains)
UniProt: F0NDX1 (all domains)
Gene: SiRe_0597

Molecule: CRISPR-associated protein, Cmr3 family

3D Structure

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Related Domains

Browse other domains in Cas_Cmr3 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupCRISPR transcript (pre-crRNA) processing endoribonuclease-related(304.51)

TT-groupCRISPR transcript (pre-crRNA) processing endoribonuclease-related(304.51.1)

FFamilyCas_Cmr3(304.51.1.6)

Pfam Families

PF09700Cas_Cmr3

CRISPR-associated protein (Cas_Cmr3)

ClanCL0362RAMPS-Cas5-like

External Links

ECOD PDB View: 6S8E RCSB PDB: 6S8E PDBe: 6S8E UniProt: F0NDX1

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