ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6shbH1 - ECOD Domain | ECOD

ECOD/Domains/e6shbH1

e6shbH1

UID: 002634484

PDB

Range: H:2-138,H:158-206
PDB: 6SHB chain H(all domains)
UniProt: F0NDX1 (all domains)
Gene: SiRe_0597

Molecule: CRISPR-associated protein, Cmr3 family

3D Structure

Loading viewer...

Related Domains

Browse other domains in Cas_Cmr3 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupCRISPR transcript (pre-crRNA) processing endoribonuclease-related(304.51)

TT-groupCRISPR transcript (pre-crRNA) processing endoribonuclease-related(304.51.1)

FFamilyCas_Cmr3(304.51.1.6)

Pfam Families

PF09700Cas_Cmr3

CRISPR-associated protein (Cas_Cmr3)

ClanCL0362RAMPS-Cas5-like

External Links

ECOD PDB View: 6SHB RCSB PDB: 6SHB PDBe: 6SHB UniProt: F0NDX1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure