ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6vkkA1 - ECOD Domain | ECOD

ECOD/Domains/e6vkkA1

e6vkkA1

UID: 002636542

PDB

Range: A:782-1011
PDB: 6VKK chain A(all domains)
UniProt: P09874 (all domains)
Gene: PARP1

Molecule: Poly [ADP-ribose] polymerase 1

3D Structure

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Related Domains

Browse other domains in PARP →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupADP-ribosylation(237)

HH-groupADP-ribosylation(237.1)

TT-groupADP-ribosylation(237.1.1)

FFamilyPARP(237.1.1.1)

Ligands

in contact, ≤ 4 Å

RucaparibRPB
drugDrugBank DB12332

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462

Pfam Families

Poly(ADP-ribose) polymerase catalytic domain

ClanCL0084ADP-ribosyl

External Links

ECOD PDB View: 6VKK RCSB PDB: 6VKK PDBe: 6VKK UniProt: P09874

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ion

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.