ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6wndC2 - ECOD Domain | ECOD

ECOD/Domains/e6wndC2

e6wndC2

UID: 002639672

PDB

Range: C:126-334
PDB: 6WND chain C(all domains)
UniProt: C3RVP5 (all domains)
Gene: sxtDIOX

Molecule: SxtDIOX

3D Structure

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Related Domains

Browse other domains in VanA_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupTBP-like(331)

HH-groupBet v1-like(331.3)

TT-groupBet v1-like(331.3.1)

FFamilyVanA_C(331.3.1.19)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
FE (III) IONFE
metal
[(2Z,3aS,4R,6Z,10aR)-2,6-diiminooctahydro-1H,8H-pyrrolo[1,2-c]purin-4-yl]methyl carbamateU5A

Pfam Families

Vanillate O-demethylase oxygenase C-terminal domain

ClanCL0209Bet_v_1_like

External Links

ECOD PDB View: 6WND RCSB PDB: 6WND PDBe: 6WND UniProt: C3RVP5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.