ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6y5qv1 - ECOD Domain | ECOD

ECOD/Domains/e6y5qv1

e6y5qv1

UID: 002641089

PDB

Range: v:1-403
PDB: 6Y5Q chain v(all domains)
UniProt: Q15393 (all domains)
Gene: SF3B3

Molecule: Splicing factor 3B subunit 3 (Pre-mRNA-splicing factor SF3b 130 kDa subunit) (SF3b130) (STAF130) (Spliceosome-associated protein 130) (SAP 130)

3D Structure

Loading viewer...

Related Domains

Browse other domains in MMS1_N →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyMMS1_N(5.1.4.36)

Pfam Families

PF10433Beta-prop_RSE1_1st

RSE1/DDB1/CPSF1 first beta-propeller

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 6Y5Q RCSB PDB: 6Y5Q PDBe: 6Y5Q UniProt: Q15393

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure