ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6jjoF2 - ECOD Domain | ECOD

ECOD/Domains/e6jjoF2

e6jjoF2

UID: 002648808

PDB

Range: F:11-32,F:82-259
PDB: 6JJO chain F(all domains)
UniProt: P0C0V0 (all domains)
Gene: degP

Molecule: Periplasmic serine endoprotease DegP (EC 3.4.21.107) (Heat shock protein DegP) (Protease Do)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Trypsin_2 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel(1.1.5)

FFamilyTrypsin_2(1.1.5.33)

Pfam Families

PF13365Trypsin_2

Trypsin-like peptidase domain

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 6JJO RCSB PDB: 6JJO PDBe: 6JJO UniProt: P0C0V0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure