ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6q1nB2 - ECOD Domain | ECOD

ECOD/Domains/e6q1nB2

e6q1nB2

UID: 002650528

PDB

Range: B:78-431
PDB: 6Q1N chain B(all domains)
UniProt: P04062 (all domains)
Gene: GBA1

Molecule: Glucosylceramidase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_30 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_30(2002.1.1.85)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
(2R,3S,4S,5R)-2-[2-(methylsulfanyl)ethyl]piperidine-3,4,5-triolP9V

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Pfam Families

PF02055Glyco_hydro_30

Glycosyl hydrolase family 30 TIM-barrel domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6Q1N RCSB PDB: 6Q1N PDBe: 6Q1N UniProt: P04062

Downloads

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Sulfate ion

DrugBank DB14546

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.