ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5rgbB1 - ECOD Domain | ECOD

ECOD/Domains/e5rgbB1

e5rgbB1

UID: 002650808

PDB

Range: B:4-302
PDB: 5RGB chain B(all domains)
UniProt: P23360 (all domains)
Gene: XYNA

Molecule: Kemp Eliminase HG3.3b

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_10 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_10(2002.1.1.18)

Ligands

in contact, ≤ 4 Å

6-NITROBENZOTRIAZOLE6NT

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00331Glyco_hydro_10

Glycosyl hydrolase family 10

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5RGB RCSB PDB: 5RGB PDBe: 5RGB UniProt: P23360

Downloads

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