ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6xiro1 - ECOD Domain | ECOD

ECOD/Domains/e6xiro1

e6xiro1

UID: 002658139

PDB

Range: o:2-106
PDB: 6XIR chain o(all domains)
UniProt: P0CX27 (all domains)
Gene: RPL42A

Molecule: Large ribosomal subunit protein eL42A (60S ribosomal protein L42-A) (L41) (YL27) (YP44)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_L44 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyRibosomal_L44(375.1.1.5)

Pfam Families

PF00935Ribosomal_L44

Ribosomal protein L44

ClanCL0167Zn_Beta_Ribbon

External Links

ECOD PDB View: 6XIR RCSB PDB: 6XIR PDBe: 6XIR UniProt: P0CX27

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure