ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6zp1C1 - ECOD Domain | ECOD

ECOD/Domains/e6zp1C1

e6zp1C1

UID: 002661074

PDB

Range: C:309-328,C:530-620,C:641-698
PDB: 6ZP1 chain C(all domains)
UniProt: P0DTC2 (all domains)
Gene: S

Molecule: Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike protein S2; Spike protein S2']

3D Structure

Loading viewer...

Related Domains

Browse other domains in CoV_S1_C →

Classification

AArchitecturebeta complex topology(a.5)

XX-groupBeta domain of coronavirus spike glycoprotein(1043)

HH-groupBeta domain of coronavirus spike glycoprotein(1043.1)

TT-groupBeta domain of coronavirus spike glycoprotein(1043.1.1)

FFamilyCoV_S1_C(1043.1.1.1)

Pfam Families

PF19209CoV_S1_C

Coronavirus spike glycoprotein S1, C-terminal

External Links

ECOD PDB View: 6ZP1 RCSB PDB: 6ZP1 PDBe: 6ZP1 UniProt: P0DTC2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure