ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7c6jA2 - ECOD Domain | ECOD

ECOD/Domains/e7c6jA2

e7c6jA2

UID: 002665168

PDB

Range: A:2-116,A:296-416
PDB: 7C6J chain A(all domains)
UniProt: Q53W80 (all domains)
Gene: TTHB082

Molecule: Sugar ABC transporter, periplasmic sugar-binding protein

3D Structure

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Related Domains

Browse other domains in Bacterial extracellular solute-binding protein / Bacterial extracellular solute-binding protein →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyBacterial extracellular solute-binding protein / Bacterial extracellular solute-binding protein(7523.1.1.9)

Ligands

in contact, ≤ 4 Å

Sulfur dioxideSO2
drugDrugBank DB16426
propane-1,1,1,3-tetrolFJO
Chloride ionCL

Pfam Families

PF01547SBP_bac_1

Bacterial extracellular solute-binding protein

ClanCL0177PBP

PF13416SBP_bac_8

Bacterial extracellular solute-binding protein

ClanCL0177PBP

External Links

ECOD PDB View: 7C6J RCSB PDB: 7C6J PDBe: 7C6J UniProt: Q53W80

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

within 5 Å only

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.