ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e7jyyC1 - ECOD Domain | ECOD

ECOD/Domains/e7jyyC1

e7jyyC1

UID: 002666301

PDB

Range: C:6799-7095
PDB: 7JYY chain C(all domains)
UniProt: P0DTD1 (all domains)
Gene: rep

Molecule: 2'-O-methyltransferase

3D Structure

Loading viewer...

Related Domains

Browse other domains in CoV_Methyltr_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyCoV_Methyltr_2(2003.1.5.56)

Ligands

in contact, ≤ 4 Å

AdemetionineSAM
drugDrugBank DB00118
Magnesium ionMG
metal
Sodium ionNA

Pfam Families

PF06460CoV_Methyltr_2

Coronavirus 2'-O-methyltransferase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 7JYY RCSB PDB: 7JYY PDBe: 7JYY UniProt: P0DTD1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

+ 1 additive (Formic acid)

Formic acidFMT
DrugBank DB01942

Shown in the structure viewer. Drug annotations from DrugDomain.