ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7khiF1 - ECOD Domain | ECOD

ECOD/Domains/e7khiF1

e7khiF1

UID: 002667167

PDB

Range: F:6-113
PDB: 7KHI chain F(all domains)
UniProt: P00579 (all domains)
Gene: rpoD

Molecule: RNA polymerase sigma factor RpoD (Sigma-70)

3D Structure

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Related Domains

Browse other domains in Sigma-70 factor, region 1.2 / Sigma-70 factor, region 1.1 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupRNA polymerase sigma factor rpoD N-terminal domain(3498)

HH-groupRNA polymerase sigma factor rpoD N-terminal domain(3498.1)

TT-groupRNA polymerase sigma factor rpoD N-terminal domain(3498.1.1)

FFamilySigma-70 factor, region 1.2 / Sigma-70 factor, region 1.1(3498.1.1.1)

Pfam Families

PF00140Sigma70_r1_2

Sigma-70 factor, region 1.2

PF03979Sigma70_r1_1

Sigma-70 factor, region 1.1

External Links

ECOD PDB View: 7KHI RCSB PDB: 7KHI PDBe: 7KHI UniProt: P00579

Downloads

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