ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6o90d1 - ECOD Domain | ECOD

ECOD/Domains/e6o90d1

e6o90d1

UID: 002669274

PDB

Range: d:2-202
PDB: 6O90 chain d(all domains)
UniProt: A0A1B4XRV7 (all domains)
Gene: rpsD

Molecule: Small ribosomal subunit protein uS4

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_S4,S4 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupAlpha-L RNA-binding motif(221.1.2)

FFamilyRibosomal_S4,S4(221.1.2.1)

Pfam Families

PF00163Ribosomal_S4

Ribosomal protein S4/S9 N-terminal domain

ClanCL0492S4

S4 domain

ClanCL0492S4

External Links

ECOD PDB View: 6O90 RCSB PDB: 6O90 PDBe: 6O90 UniProt: A0A1B4XRV7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure