ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6oigD1 - ECOD Domain | ECOD

ECOD/Domains/e6oigD1

e6oigD1

UID: 002669336

PDB

Range: D:262-557
PDB: 6OIG chain D(all domains)
UniProt: P26321 (all domains)
Gene: RPL5

Molecule: Large ribosomal subunit protein uL18 (60S ribosomal protein L5) (L1) (L1a) (Ribosomal 5S RNA-binding protein) (YL3)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_L18_c,Ribosomal_L5e →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyRibosomal_L18_c,Ribosomal_L5e(2484.1.1.69)

Pfam Families

PF14204Ribosomal_L18_c

Ribosomal L18 C-terminal region

PF17144Ribosomal_L5e

Ribosomal large subunit proteins 60S L5, and 50S L18

ClanCL0267S11_L18p

External Links

ECOD PDB View: 6OIG RCSB PDB: 6OIG PDBe: 6OIG UniProt: P26321

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure