ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6v7yA1 - ECOD Domain | ECOD

ECOD/Domains/e6v7yA1

e6v7yA1

UID: 002672201

PDB

Range: A:1-180
PDB: 6V7Y chain A(all domains)
UniProt: P15813 (all domains)
Gene: CD1D

Molecule: Antigen-presenting glycoprotein CD1d

3D Structure

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Related Domains

Browse other domains in MHC_I_3 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupMHC antigen-recognition domain(233)

HH-groupMHC antigen-recognition domain(233.1)

TT-groupMHC antigen-recognition domain(233.1.1)

FFamilyMHC_I_3(233.1.1.6)

Ligands

in contact, ≤ 4 Å

Alpha-galactosylceramideAGH
drugDrugBank DB12232
N-AcetylglucosamineNAG
drugDrugBank DB00141

Pfam Families

PF16497MHC_I_3

MHC-I family domain

ClanCL0343MHC

External Links

ECOD PDB View: 6V7Y RCSB PDB: 6V7Y PDBe: 6V7Y UniProt: P15813

Downloads

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Chloride ionCL

Shown in the structure viewer. Drug annotations from DrugDomain.