ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6w6pe1 - ECOD Domain | ECOD

ECOD/Domains/e6w6pe1

e6w6pe1

UID: 002672692

PDB

Range: e:3-76
PDB: 6W6P chain e(all domains)
UniProt: A0A1B4XKW0 (all domains)
Gene: rpsE

Molecule: Small ribosomal subunit protein uS5

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_S5 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupdsRBD-like(330)

HH-groupdsRNA-binding domain-like(330.1)

TT-groupdsRNA-binding domain-like(330.1.1)

FFamilyRibosomal_S5(330.1.1.2)

Pfam Families

PF00333Ribosomal_S5

Ribosomal protein S5, N-terminal domain

ClanCL0196DSRM

External Links

ECOD PDB View: 6W6P RCSB PDB: 6W6P PDBe: 6W6P UniProt: A0A1B4XKW0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure