ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6y5nA2 - ECOD Domain | ECOD

ECOD/Domains/e6y5nA2

e6y5nA2

UID: 002674403

PDB

Range: A:478-615
PDB: 6Y5N chain A(all domains)
UniProt: Q86Y01 (all domains)
Gene: DTX1

Molecule: E3 ubiquitin-protein ligase DTX1

3D Structure

Loading viewer...

Related Domains

Browse other domains in DTC →

Classification

AArchitecturea+b two layers(a.11)

XX-groupCarboxyl terminal domain of human deltex 3-like(3169)

HH-groupCarboxyl terminal domain of human deltex 3-like(3169.1)

TT-groupCarboxyl terminal domain of human deltex 3-like(3169.1.1)

FFamilyDTC(3169.1.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Zinc ionZN
metalwithin 5 Å only

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Pfam Families

Deltex C-terminal domain

External Links

ECOD PDB View: 6Y5N RCSB PDB: 6Y5N PDBe: 6Y5N UniProt: Q86Y01

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Shown in the structure viewer. Drug annotations from DrugDomain.