ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6ybdL2 - ECOD Domain | ECOD

ECOD/Domains/e6ybdL2

e6ybdL2

UID: 002674522

PDB

Range: L:135-201
PDB: 6YBD chain L(all domains)
UniProt: P15880 (all domains)
Gene: RPS2

Molecule: Small ribosomal subunit protein uS5 (40S ribosomal protein S2) (40S ribosomal protein S4) (Protein LLRep3)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_S5 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupdsRBD-like(330)

HH-groupdsRNA-binding domain-like(330.1)

TT-groupdsRNA-binding domain-like(330.1.1)

FFamilyRibosomal_S5(330.1.1.2)

Pfam Families

PF00333Ribosomal_S5

Ribosomal protein S5, N-terminal domain

ClanCL0196DSRM

External Links

ECOD PDB View: 6YBD RCSB PDB: 6YBD PDBe: 6YBD UniProt: P15880

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure