ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6ypuf1 - ECOD Domain | ECOD

ECOD/Domains/e6ypuf1

e6ypuf1

UID: 002674995

PDB

Range: f:78-164
PDB: 6YPU chain f(all domains)
UniProt: D0CD14 (all domains)
Gene: rpsE

Molecule: Small ribosomal subunit protein uS5

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_S5_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibosomal protein S5 domain 2-like(212)

HH-groupRibosomal protein S5 domain 2-like(212.1)

TT-groupRibosomal protein S5 domain 2-like(212.1.1)

FFamilyRibosomal_S5_C(212.1.1.16)

Pfam Families

PF03719Ribosomal_S5_C

Ribosomal protein S5, C-terminal domain

ClanCL0329S5

External Links

ECOD PDB View: 6YPU RCSB PDB: 6YPU PDBe: 6YPU UniProt: D0CD14

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure