ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6zkeH1 - ECOD Domain | ECOD

ECOD/Domains/e6zkeH1

e6zkeH1

UID: 002676095

PDB

Range: H:1-318
PDB: 6ZKE chain H(all domains)
UniProt: O78747 (all domains)
Gene: MT-ND1

Molecule: NADH-ubiquinone oxidoreductase chain 1

3D Structure

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Related Domains

Browse other domains in NADHdh →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupSodium/proton antiporter subunits-like(3281)

HH-groupSodium/proton antiporter subunits-like(3281.1)

TT-groupNADH-quinone oxidoreductase subunit 8 (Nqo8)-related(3281.1.2)

FFamilyNADHdh(3281.1.2.1)

Ligands

in contact, ≤ 4 Å

Tetrastearoyl cardiolipinCDL
drugDrugBank DB03429
2-decyl-5,6-dimethoxy-3-methylcyclohexa-2,5-diene-1,4-dioneDCQ
drugDrugBank DB07640

Pfam Families

NADH dehydrogenase

ClanCL0425ComplexI-N

External Links

ECOD PDB View: 6ZKE RCSB PDB: 6ZKE PDBe: 6ZKE UniProt: O78747

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,2-Distearoyl-sn-glycerophosphoethanolamine3PE

1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINEPC1

Shown in the structure viewer. Drug annotations from DrugDomain.