ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6zkoN1 - ECOD Domain | ECOD

ECOD/Domains/e6zkoN1

e6zkoN1

UID: 002676530

PDB

Range: N:1-347
PDB: 6ZKO chain N(all domains)
UniProt: O78748 (all domains)
Gene: MT-ND2

Molecule: NADH-ubiquinone oxidoreductase chain 2

3D Structure

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Related Domains

Browse other domains in Proton_antipo_M,NADH_dehy_S2_C →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupSodium/proton antiporter subunits-like(3281)

HH-groupSodium/proton antiporter subunits-like(3281.1)

TT-groupNADH-quinone oxidoreductase subunit L (NuoL)-related(3281.1.1)

FFamilyProton_antipo_M,NADH_dehy_S2_C(3281.1.1.6)

Ligands

in contact, ≤ 4 Å

Tetrastearoyl cardiolipinCDL
drugDrugBank DB03429
1,2-Distearoyl-sn-glycerophosphoethanolamine3PE
1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINEPC1

Pfam Families

PF00361Proton_antipo_M

NADH:quinone oxidoreductase/Mrp antiporter, TM

ClanCL0425ComplexI-N

PF06444NADH_dehy_S2_C

NADH dehydrogenase subunit 2 C-terminus

External Links

ECOD PDB View: 6ZKO RCSB PDB: 6ZKO PDBe: 6ZKO UniProt: O78748

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.