ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6yu9A4 - ECOD Domain | ECOD

ECOD/Domains/e6yu9A4

e6yu9A4

UID: 002697478

PDB

Range: A:73-233
PDB: 6YU9 chain A(all domains)
UniProt: U5RTE2 (all domains)

Molecule: Carbon-monoxide dehydrogenase (Acceptor),Carbon-monoxide dehydrogenase (Acceptor)

3D Structure

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Related Domains

Browse other domains in Prismane →

Classification

AArchitecturealpha bundles(a.7)

XX-groupHelical bundle domain in prismane-like proteins(4044)

HH-groupHelical bundle domain in prismane-like proteins(4044.1)

TT-groupHelical bundle domain in prismane-like proteins(4044.1.1)

FFamilyPrismane(4044.1.1.1)

Ligands

in contact, ≤ 4 Å

Iron/sulfur clusterSF4

+ 2 additives (Acetate ion, 1,2-ETHANEDIOL)

Acetate ionACT
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03063Prismane

Prismane/CO dehydrogenase family

ClanCL0113GT-B

External Links

ECOD PDB View: 6YU9 RCSB PDB: 6YU9 PDBe: 6YU9 UniProt: U5RTE2

Downloads

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