ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1v1tA1 - ECOD Domain | ECOD

ECOD/Domains/e1v1tA1

e1v1tA1

UID: 000026986

PDB

Range: A:197-273
PDB: 1V1T chain A(all domains)
UniProt: O00560 (all domains)
Gene: SDCBP

Molecule: SYNTENIN 1

3D Structure

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Related Domains

Browse other domains in PDZ →

Classification

AArchitecturebeta barrels(a.1)

XX-groupPDZ domain(7)

HH-groupPDZ domain(7.1)

TT-groupPDZ domain(7.1.1)

FFamilyPDZ(7.1.1.1)

Ligands

in contact, ≤ 4 Å

Benzoic acidBEZ
drugDrugBank DB03793

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PDZ domain

ClanCL0466PDZ-like

External Links

ECOD PDB View: 1V1T RCSB PDB: 1V1T PDBe: 1V1T UniProt: O00560

Downloads

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