ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1obyB1 - ECOD Domain | ECOD

ECOD/Domains/e1obyB1

e1obyB1

UID: 000026991

PDB

Range: B:197-270
PDB: 1OBY chain B(all domains)
UniProt: O00560 (all domains)
Gene: SDCBP

Molecule: SYNTENIN 1

3D Structure

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Related Domains

Browse other domains in PDZ →

Classification

AArchitecturebeta barrels(a.1)

XX-groupPDZ domain(7)

HH-groupPDZ domain(7.1)

TT-groupPDZ domain(7.1.1)

FFamilyPDZ(7.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PDZ domain

ClanCL0466PDZ-like

External Links

ECOD PDB View: 1OBY RCSB PDB: 1OBY PDBe: 1OBY UniProt: O00560

Downloads

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