ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7aodM8 - ECOD Domain | ECOD

ECOD/Domains/e7aodM8

e7aodM8

UID: 002700210

PDB

Range: M:842-1066
PDB: 7AOD chain M(all domains)
UniProt: P15398 (all domains)
Gene: rpa1

Molecule: DNA-directed RNA polymerase I subunit rpa1 (EC 2.7.7.6) (DNA-directed RNA polymerase I 190 kDa polypeptide) (DNA-directed RNA polymerase I largest subunit)

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupsecond helical domain in RNA-polymerase beta-prime subunit(4958)

HH-groupsecond helical domain in RNA-polymerase beta-prime subunit(4958.1)

TT-groupsecond helical domain in RNA-polymerase beta-prime subunit(4958.1.1)

FFamilyRNA_pol_Rpb1_5,RNA_pol_Rpb1_4(4958.1.1.1)

Pfam Families

PF04998RNA_pol_Rpb1_5

RNA polymerase Rpb1, domain 5

PF05000RNA_pol_Rpb1_4

RNA polymerase Rpb1, domain 4

External Links

ECOD PDB View: 7AOD RCSB PDB: 7AOD PDBe: 7AOD UniProt: P15398

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