ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ry8A2 - ECOD Domain | ECOD

ECOD/Domains/e5ry8A2

e5ry8A2

UID: 002711134

PDB

Range: A:719-856
PDB: 5RY8 chain A(all domains)
UniProt: Q92835 (all domains)
Gene: INPP5D

Molecule: Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1

3D Structure

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Related Domains

Browse other domains in C2_SHIP1-2_2nd →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupC2 domain(11.2)

TT-groupC2 domain(11.2.1)

FFamilyC2_SHIP1-2_2nd(11.2.1.44)

Ligands

in contact, ≤ 4 Å

MANGANESE (II) IONMN
metal

+ 3 additives (Dimethyl sulfoxide, Phosphate ion, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL)

Dimethyl sulfoxideDMS
DrugBank DB01093
Phosphate ion

Pfam Families

PF24147C2_SHIP1-2_2nd

SHIP1/2 second C2 domain

ClanCL0154C2

External Links

ECOD PDB View: 5RY8 RCSB PDB: 5RY8 PDBe: 5RY8 UniProt: Q92835

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14523

2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOLBTB

Shown in the structure viewer. Drug annotations from DrugDomain.