ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5rymA1 - ECOD Domain | ECOD

ECOD/Domains/e5rymA1

e5rymA1

UID: 002711161

PDB

Range: A:297-390
PDB: 5RYM chain A(all domains)
UniProt: Q9Y2J2 (all domains)
Gene: EPB41L3

Molecule: Isoform 2 of Band 4.1-like protein 3

3D Structure

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Related Domains

Browse other domains in FERM_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupPH domain-like(220)

HH-groupPH domain-like(220.1)

TT-groupPH domain-like(220.1.1)

FFamilyFERM_C(220.1.1.22)

Ligands

in contact, ≤ 4 Å

ethyl 1-pyrazin-2-ylpiperidine-4-carboxylateHGE

+ 2 additives (Dimethyl sulfoxide, 1,2-ETHANEDIOL)

Dimethyl sulfoxideDMS
DrugBank DB01093
1,2-ETHANEDIOLEDO

Pfam Families

FERM C-terminal PH-like domain

ClanCL0266PH

External Links

ECOD PDB View: 5RYM RCSB PDB: 5RYM PDBe: 5RYM UniProt: Q9Y2J2

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.