ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6vxzC1 - ECOD Domain | ECOD

ECOD/Domains/e6vxzC1

e6vxzC1

UID: 002714065

PDB

Range: C:226-412
PDB: 6VXZ chain C(all domains)
UniProt: G0GA88 (all domains)
Gene: Spith_0644

Molecule: SthK

3D Structure

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Related Domains

Browse other domains in cNMP_binding →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilycNMP_binding(10.12.1.1)

Ligands

in contact, ≤ 4 Å

Cyclic adenosine monophosphateCMP
drugDrugBank DB02527
(1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl(9Z)-octadec-9-enoatePGW

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00027cNMP_binding

Cyclic nucleotide-binding domain

ClanCL0029Cupin

External Links

ECOD PDB View: 6VXZ RCSB PDB: 6VXZ PDBe: 6VXZ UniProt: G0GA88

Downloads

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