ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6vymF1 - ECOD Domain | ECOD

ECOD/Domains/e6vymF1

e6vymF1

UID: 002714194

PDB

Range: F:180-280
PDB: 6VYM chain F(all domains)
UniProt: P0C0S1 (all domains)
Gene: mscS

Molecule: Small-conductance mechanosensitive channel

3D Structure

Loading viewer...

Related Domains

Browse other domains in MS_channel_3rd →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupMechanosensitive channel protein MscS (YggB), C-terminal domain(304.39)

TT-groupMechanosensitive channel protein MscS (YggB), C-terminal domain(304.39.1)

FFamilyMS_channel_3rd(304.39.1.1)

Pfam Families

PF21082MS_channel_3rd

Mechanosensitive ion channel MscS, C-terminal

ClanCL0875MscS_C_sf

External Links

ECOD PDB View: 6VYM RCSB PDB: 6VYM PDBe: 6VYM UniProt: P0C0S1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure