ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ye1B1 - ECOD Domain | ECOD

ECOD/Domains/e6ye1B1

e6ye1B1

UID: 002718102

PDB

Range: B:332-549
PDB: 6YE1 chain B(all domains)
UniProt: P21589 (all domains)
Gene: NT5E

Molecule: 5'-nucleotidase

3D Structure

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Related Domains

Browse other domains in 5_nucleotid_C →

Classification

AArchitecturea+b complex topology(a.14)

XX-group5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain(805)

HH-group5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain(805.1)

TT-group5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain(805.1.1)

FFamily5_nucleotid_C(805.1.1.1)

Ligands

in contact, ≤ 4 Å

[(2~{R},3~{S},4~{R},5~{R})-5-[2-chloranyl-6-(cyclopentylamino)purin-9-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxymethylphosphonic acidOO2

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF028725_nucleotid_C

5'-nucleotidase, C-terminal domain

ClanCL0781NadN_C

External Links

ECOD PDB View: 6YE1 RCSB PDB: 6YE1 PDBe: 6YE1 UniProt: P21589

Downloads

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