ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6xohB2 - ECOD Domain | ECOD

ECOD/Domains/e6xohB2

e6xohB2

UID: 002722462

PDB

Range: B:6-167,B:383-444
PDB: 6XOH chain B(all domains)
UniProt: Q9UBT2 (all domains)
Gene: UBA2

Molecule: SUMO-activating enzyme subunit 2

3D Structure

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Related Domains

Browse other domains in ThiF →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupActivating enzymes of the ubiquitin-like proteins(2003.1.9)

FFamilyThiF(2003.1.9.1)

Ligands

in contact, ≤ 4 Å

{(1R,2S,4R)-4-[(5-{4-[(1R)-3,4-dihydro-1H-2-benzopyran-1-yl]thiophene-2-carbonyl}pyrimidin-4-yl)amino]-2-hydroxycyclopentyl}methyl sulfamateVB7
Zinc ionZN
metal

+ 1 additive (Sulfate ion)

Sulfate ion

Pfam Families

ThiF family

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 6XOH RCSB PDB: 6XOH PDBe: 6XOH UniProt: Q9UBT2

Downloads

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DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.