ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6xohC1 - ECOD Domain | ECOD

ECOD/Domains/e6xohC1

e6xohC1

UID: 002722464

PDB

Range: C:22-97
PDB: 6XOH chain C(all domains)
UniProt: P63165 (all domains)
Gene: SUMO1

Molecule: Small ubiquitin-related modifier 1

3D Structure

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Related Domains

Browse other domains in Rad60-SLD →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyRad60-SLD(221.1.1.44)

Ligands

in contact, ≤ 4 Å

{(1R,2S,4R)-4-[(5-{4-[(1R)-3,4-dihydro-1H-2-benzopyran-1-yl]thiophene-2-carbonyl}pyrimidin-4-yl)amino]-2-hydroxycyclopentyl}methyl sulfamateVB7

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF11976Rad60-SLD

Ubiquitin-2 like Rad60 SUMO-like

ClanCL0072Ubiquitin

External Links

ECOD PDB View: 6XOH RCSB PDB: 6XOH PDBe: 6XOH UniProt: P63165

Downloads

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